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Amorgos is connected with ferries from Piraeus port on the route Piraeus, Paros, Naxos, small Cyclades, Amorgos, Astypalea. There is a regular ferry service from Piraeus to Aegiali port, three or four times a week.

The central port of Amorgos is Katapola, at a distance of 23 kilometers from Aegiali. The port of Katapola is served by ferries and faster ships on a daily basis in the summer. Also during the summer, there is a ferry connection between Katapola and Mykonos, Santorini and the western Cyclades.

The route between Katapola and Aegiali is served by the local bus service and taxis.